BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B07SP1|AL425480
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1309 1899 0.0
>3x_Contig1309
Length = 8998
Score = 1899 bits (956), Expect = 0.0
Identities = 976/982 (99%), Gaps = 2/982 (0%)
Strand = Plus / Plus
Query: 1 gatcttcttaccagcaggaataacttctttaccaataccatcacctggaattaaaccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 gatcttcttaccagcaggaataacttctttaccaataccatcacctggaattaaaccaat 2958
Query: 61 tgttaaattcttcgcattggaagcgtaas-acgacgggacaattgaatgaaacgtgttct 119
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2959 tgttaaattcttcgcattggaagcgtaagcacgacgggacaattgaatgaaacgtgttct 3018
Query: 120 catcatattgaatggttgttatatagcgaaatgaaacaattcgctgcttgatcttcggga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 catcatattgaatggttgttatatagcgaaatgaaacaattcgctgcttgatcttcggga 3078
Query: 180 caagtagttcgataaccttaaaacaaagtaaaatgtgatggttttcacagaatcaactac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 caagtagttcgataaccttaaaacaaagtaaaatgtgatggttttcacagaatcaactac 3138
Query: 240 agctgcaatccaatccaaatcgtaacactggggtgtatttatagtttacaggttattcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 agctgcaatccaatccaaatcgtaacactggggtgtatttatagtttacaggttattcag 3198
Query: 300 tttcctgtaactcatatttctttcaatgatcccaatgactggttgatgaaatttcgaatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3199 tttcctgtaactcatatttctttcaatgatcccaatgactggttgatgaaatttcgaatt 3258
Query: 360 tccacaggaatttatctgcgattcattgggaaactgaaaactccctttcgagcattttga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3259 tccacaggaatttatctgcgattcattgggaaactgaaaactccctttcgagcattttga 3318
Query: 420 aagtagtcaggtgactaaacgatagataaccgtatgccttcacgtaatacataaacatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3319 aagtagtcaggtgactaaacgatagataaccgtatgccttcacgtaatacataaacatat 3378
Query: 480 atgttgacacatcaaggaggacttctagatctgatgttgcagcatatagcattgctagtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3379 atgttgacacatcaaggaggacttctagatctgatgttgcagcatatagcattgctagtt 3438
Query: 540 cgatatcgatgggattttgtcgtcagtacaggttttaggttatacggattttggtacaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3439 cgatatcgatgggattttgtcgtcagtacaggttttaggttatacggattttggtacaat 3498
Query: 600 tctctcttttttcttttgctgcctttacactttttttcacgtttttgtatgtgaaagtca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3499 tctctcttttttcttttgctgcctttacactttttttcacgtttttgtatgtaaaagtca 3558
Query: 660 tctcatctcatcccgtcataccgactcttagcttaaatctaaaatataagcgtccattcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 tctcatctcatcccgtcataccgactcttagcttaaatctaaaatataagcgtccattcc 3618
Query: 720 atcaaacgcgtcacttgatcgcagcagttgaattagaaatgactgctgaagagctaatat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619 atcaaacgcgtcacttgatcgcagcagttgaattagaaatgactgctgaagagctaatat 3678
Query: 780 acccagaaagtgagccaaggctctattcctctgattcggattttgacagtkataacgatg 839
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3679 acccagaaagtgagccaaggctctattcctctgattcggattttgacagtgataacgatg 3738
Query: 840 aagataccaatattccttactatgagcaaaccgttaaagaaatcaaagatggtgatcagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 aagataccaatattccttactatgagcaaaccgttaaagaaatcaaagatggtgatcagt 3798
Query: 900 atgtgtgcatgatttgtacagtggagcttgawtctacatgtcggatgtatgcgtgtgatt 959
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3799 atgtgtgcatgatttgtacagtggagcttgattctacatgtcggatgtatgcgtgtgatt 3858
Query: 960 -ctgttatagagttttcgacta 980
|||||||||||||||||||||
Sbjct: 3859 cctgttatagagttttcgacta 3880
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8466
Number of Sequences: 1807
Number of extensions: 8466
Number of successful extensions: 273
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)